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Between the 2006 and 2007 seasons, Troy Glaus hit the most homers for the Blue Jays, with 58 homers.

toronto blue jays players most home runs in 2006 to 2007
GlausWellsRiosOverbayThomasHillZaunStairsMolinaJohnsonLindHillenbrandHinskeCatalanottoAdamsMcDonaldClaytonFasanoGriffinLunaBarkerPhillips58484132262322211914131212754111111
NAMEHRGABRH2B3BRBIBBHBPSOSBCSPATBXBHSHSFIBBGIDPAVGOBPSLGOPSWRCWRAAWOBAWRC+BRAA
Troy GlausTroy Glaus582689251652374611661478236331,090459105010832.256.360.496.85616832.1.36612028.2
Vernon WellsVernon Wells483031,19517632876918610361792781,319566133015422.274.331.474.80517914.6.34410610.2
Alex RiosAlex Rios412891,093182327761316790919232101,209552130017419.299.352.505.85718535.36512031.3
Lyle OverbayLyle Overbay322791,0061312837631361023174731,116461111051131.281.348.458.80615414.7.34710710.7
Frank ThomasFrank Thomas26155531631473009581794006242555605314.277.377.480.8579922.1.37312721
Aaron HillAaron Hill233151,154157336755128839168951,263490103710636.291.341.425.7651592.33399-2.2
Gregg ZaunGregg Zaun2220962182159431929259702730270661111119.256.351.435.786954.5.3391022.2
Matt StairsMatt Stairs2112535758103281644426621405196500257.289.368.549.9177019.5.38813718.8
Bengie MolinaBengie Molina19117433441232015719447114582024002115.284.319.467.785591.6.33699-0.7
Reed JohnsonReed Johnson142137361172124746349321371248243096561416.288.358.420.7781118.2.3431045.1
Adam LindAdam Lind131073504291220542117712376152352207.260.302.434.73643-3.9.31990-4.8
Shea HillenbrandShea Hillenbrand128129640891513914640123191422803215.301.342.480.821455.1.3501093.5
Eric HinskeEric Hinske1278197355292292704911224101230026.264.353.513.865356.8.3671205.7
Frank CatalanottoFrank Catalanotto7128437561313625652437134991924524011.300.376.439.8167411.2.3581148.8
Russ AdamsRuss Adams51173114569171402915533349103235316.222.288.331.61927-16.9.27559-18.4
John McDonaldJohn McDonald422758767140275542748914463918936183012.239.275.322.59744-35.9.26553-37.9
Royce ClaytonRoyce Clayton169189234814012141502121065153308.254.304.344.64819-7.4.28970-7.8
Sal FasanoSal Fasano1164558304211900491441000.178.229.311.5402-3.8.24038-3.8
John-Ford GriffinJohn-Ford Griffin1610431033050014720100.300.429.7001.12931.4.4491771.4
Hector LunaHector Luna1224257004211020461010100.167.217.238.4551-4.8.20716-4.9
Kevin BarkerKevin Barker112173410110100018820000.235.278.471.7482-0.2.31786-0.3
Jason PhillipsJason Phillips180192154213018113260220958142107.219.271.302.57313-13.25849-13.5
Ryan RobertsRyan Roberts117263200131110030510001.077.200.192.3920-3.6.1914-3.7

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